The ISME Journal The ISME Journal seeks to promote diverse and integrated areas of microbial ecology spanning the breadth of microbial life, including bacteria, archaea, microbial eukaryotes, and viruses. Contributions of broad biological interest and impact are especially encouraged. Topics of particular interest within the journals scope include: microbial population and community ecology, microbe-microbe and microbe-host interactions, evolutionary genetics, integrated genomics and post-genomics approaches in microbial ecology, microbial engineering, geomicrobiology and microbial contributions to geochemical cycles, microbial ecology and functional diversity of natural habitats, and microbial ecosystem impacts. http://feeds.nature.com/ismej/rss/current Nature Publishing Group en © 2024 Macmillan Publishers Limited, part of Springer Nature. All rights reserved. The ISME Journal © 2024 Macmillan Publishers Limited, part of Springer Nature. All rights reserved. permissions@nature.com The ISME Journal https://www.nature.com/uploads/product/ismej/rss.gif http://feeds.nature.com/ismej/rss/current <![CDATA[Publisher Correction: Progress and challenges in exploring aquatic microbial communities using non-targeted metabolomics]]> https://www.nature.com/articles/s41396-023-01552-4 The ISME Journal, Published online: 22 November 2023; doi:10.1038/s41396-023-01552-4

Publisher Correction: Progress and challenges in exploring aquatic microbial communities using non-targeted metabolomics]]>
Monica ThukralAndrew E. AllenDaniel Petras doi:10.1038/s41396-023-01552-4 The ISME Journal, Published online: 2023-11-22; | doi:10.1038/s41396-023-01552-4 2023-11-22 The ISME Journal 10.1038/s41396-023-01552-4 https://www.nature.com/articles/s41396-023-01552-4
<![CDATA[Endosymbionts modulate virus effects on aphid-plant interactions]]> https://www.nature.com/articles/s41396-023-01549-z The ISME Journal, Published online: 18 November 2023; doi:10.1038/s41396-023-01549-z

Endosymbionts modulate virus effects on aphid-plant interactions]]>
Patricia SanchesConsuelo M. De MoraesMark C. Mescher doi:10.1038/s41396-023-01549-z The ISME Journal, Published online: 2023-11-18; | doi:10.1038/s41396-023-01549-z 2023-11-18 The ISME Journal 10.1038/s41396-023-01549-z https://www.nature.com/articles/s41396-023-01549-z
<![CDATA[Correction: Diversification during cross-kingdom microbial experimental evolution]]> https://www.nature.com/articles/s41396-023-01551-5 The ISME Journal, Published online: 15 November 2023; doi:10.1038/s41396-023-01551-5

Correction: Diversification during cross-kingdom microbial experimental evolution]]>
Ákos T. Kovács doi:10.1038/s41396-023-01551-5 The ISME Journal, Published online: 2023-11-15; | doi:10.1038/s41396-023-01551-5 2023-11-15 The ISME Journal 10.1038/s41396-023-01551-5 https://www.nature.com/articles/s41396-023-01551-5
<![CDATA[Ginsenoside Rg3 enriches SCFA-producing commensal bacteria to confer protection against enteric viral infection via the cGAS-STING-type I IFN axis]]> https://www.nature.com/articles/s41396-023-01541-7 The ISME Journal, Published online: 10 November 2023; doi:10.1038/s41396-023-01541-7

Ginsenoside Rg3 enriches SCFA-producing commensal bacteria to confer protection against enteric viral infection via the cGAS-STING-type I IFN axis]]>
Gan WangJingtianyi LiuYanan ZhangJinyan XieShuxian ChenYuhua ShiFushan ShiShu Jeffrey Zhu doi:10.1038/s41396-023-01541-7 The ISME Journal, Published online: 2023-11-10; | doi:10.1038/s41396-023-01541-7 2023-11-10 The ISME Journal 10.1038/s41396-023-01541-7 https://www.nature.com/articles/s41396-023-01541-7
<![CDATA[Widespread and largely unknown prophage activity, diversity, and function in two genera of wheat phyllosphere bacteria]]> https://www.nature.com/articles/s41396-023-01547-1 The ISME Journal, Published online: 02 November 2023; doi:10.1038/s41396-023-01547-1

Widespread and largely unknown prophage activity, diversity, and function in two genera of wheat phyllosphere bacteria]]>
Peter Erdmann DoughertyTue Kjærgaard NielsenLeise RiberHelen Helgå LadingLaura Milena Forero-JuncoWitold KotJos M. RaaijmakersLars Hestbjerg Hansen doi:10.1038/s41396-023-01547-1 The ISME Journal, Published online: 2023-11-02; | doi:10.1038/s41396-023-01547-1 2023-11-02 The ISME Journal 10.1038/s41396-023-01547-1 https://www.nature.com/articles/s41396-023-01547-1
<![CDATA[Filamentous virus-like particles are present in coral dinoflagellates across genera and ocean basins]]> https://www.nature.com/articles/s41396-023-01526-6 The ISME Journal, Published online: 01 November 2023; doi:10.1038/s41396-023-01526-6

Filamentous virus-like particles are present in coral dinoflagellates across genera and ocean basins]]>
Lauren I. Howe-KerrAnna M. KnochelMatthew D. MeyerJordan A. SimsCarly E. KarrickCarsten G. B. GrupstraAlex J. VegliaAndrew R. ThurberRebecca L. Vega ThurberAdrienne M. S. Correa doi:10.1038/s41396-023-01526-6 The ISME Journal, Published online: 2023-11-01; | doi:10.1038/s41396-023-01526-6 2023-11-01 The ISME Journal 10.1038/s41396-023-01526-6 https://www.nature.com/articles/s41396-023-01526-6
<![CDATA[Coordinated proteome change precedes cell lysis and death in a mat-forming cyanobacterium]]> https://www.nature.com/articles/s41396-023-01545-3 The ISME Journal, Published online: 01 November 2023; doi:10.1038/s41396-023-01545-3

Coordinated proteome change precedes cell lysis and death in a mat-forming cyanobacterium]]>
Jackie ZorzAlexandre J. PaquetteTimber GillisAngela KourisVarada KhotCigdem DemirkayaHector De La Hoz SieglerMarc StrousAgasteswar Vadlamani doi:10.1038/s41396-023-01545-3 The ISME Journal, Published online: 2023-11-01; | doi:10.1038/s41396-023-01545-3 2023-11-01 The ISME Journal 10.1038/s41396-023-01545-3 https://www.nature.com/articles/s41396-023-01545-3
<![CDATA[Simultaneous entry as an adaptation to virulence in a novel satellite-helper system infecting <i>Streptomyces</i> species]]> https://www.nature.com/articles/s41396-023-01548-0 The ISME Journal, Published online: 31 October 2023; doi:10.1038/s41396-023-01548-0

Simultaneous entry as an adaptation to virulence in a novel satellite-helper system infecting Streptomyces species]]>
Streptomyces species]]> Tagide deCarvalhoElia MascoloSteven M. CarusoJúlia López-PérezKathleen Weston-HaferChristopher ShafferIvan Erill doi:10.1038/s41396-023-01548-0 The ISME Journal, Published online: 2023-10-31; | doi:10.1038/s41396-023-01548-0 2023-10-31 The ISME Journal 10.1038/s41396-023-01548-0 https://www.nature.com/articles/s41396-023-01548-0